Jr. Vandermeer, EVOLUTION OF NOVEL METABOLIC PATHWAYS FOR THE DEGRADATION OF CHLOROAROMATIC COMPOUNDS, Antonie van Leeuwenhoek, 71(1-2), 1997, pp. 159-178
Chlorobenzenes are substrates not easily metabolized by existing bacte
ria in the environment. Specific strains, however, have been isolated
from polluted environments or in laboratory selection procedures that
use chlorobenzenes as their sole carbon and energy source. Genetic ana
lysis indicated that these bacteria have acquired a novel combination
of previously existing genes. One of these gene clusters contains the
genes for an aromatic ring dioxygenase and a dihydrodiol dehydrogenase
. The other contains the genes for a chlorocatechol oxidative pathway.
Comparison of such gene clusters with those from other aromatics degr
ading bacteria reveals that this process of recombining or assembly of
existing genetic material must have occurred in many of them. Similar
ities of gene functions between pathways suggest that incorporation of
existing genetic material has been the most important mechanism of ex
panding a metabolic pathway. Only in a few cases a horizontal expansio
n, that is acquisition of gene functions to accomodate a wider range o
f substrates which are then all transformed in one central pathway, is
observed on the genetic level. Evidence is presented indicating that
the assembly process may trigger a faster divergence of nearby gene se
quences. Further 'fine-tuning',for example by developing a proper regu
lation, is then the next step in the adaptation.