A ferredoxin has been purified to homogeneity from the ancient protozo
an parasite Giardia duodenalis. As far as we know, this is the first e
lectron transport protein to be characterised from the organism. The f
erredoxin exhibits absorption maxima at 296 and 406 nm with molar abso
rption coefficients of epsilon(296) = 16650 +/- 240 M(-1) cm(-1) and e
psilon(406) = 13100 +/- 370 M(-1) cm(-1) respectively. The A(406)/A(29
6) ratio ranged over 0.78-0.82. The molecular mass of the apoprotein c
alculated by mass spectrometry was 5730 +/- 100 Da and the minimum mol
ecular mass by amino acid analysis was 5926Da. There were four cystein
e residues/molecule protein but no methionine, arginine, histidine or
tyrosine. The absence of these latter residues is consistent with the
amino acid content of most ferredoxins. The N-terminal amino acid sequ
ence exhibited greatest similarity to Desulfovibrio gigas ferredoxin I
I and indicated the potential to coordinate an iron-sulfur cluster. Th
ere were 3.21 +/- 0.41 mol sulfide and 2.65 +/- 0.06 mol iron/mol prot
ein. Electron paramagnetic resonance studies of this protein have indi
cated the presence of an iron-sulfur centre consistent with those of k
nown ferredoxins. Ferredoxin serves as a biological electron acceptor
from giardial pyruvate dehydrogenase with metronidazole as a terminal
electron acceptor. Such a pathway may serve as a possible mechanism fo
r the reductive activation of metronidazole in this parasite. A second
ferredoxin has been purified to homogeneity, but at this stage there
is insufficient material to fully characterise this protein. No other
low-molecular-mass electron transport proteins have been identified in
Giardia under the growth conditions described.