Ij. Koralnik et al., PHYLOGENETIC ASSOCIATIONS OF HUMAN AND SIMIAN T-CELL LEUKEMIA LYMPHOTROPIC VIRUS TYPE-I STRAINS - EVIDENCE FOR INTERSPECIES TRANSMISSION/, Journal of virology, 68(4), 1994, pp. 2693-2707
Homologous env sequences from 17 human T-leukemia/lymphotropic virus t
ype I (HTLV-I) strains from throughout the world and from 25 simian T-
leukemia/lymphotropic virus type I (STLV-I) strains from 12 simian spe
cies in Asia and Africa were analyzed in a phylogenetic context as an
approach to resolving the natural history of these related retroviruse
s. STLV-I exhibited greater overall sequence variation between strains
(1 to 18% compared with 0 to 9% for HTLV-I), supporting the simian or
igin of the modern viruses in all species. Three HTLV-I phylogenetic c
lusters or clades (cosmopolitan, Zaire, and Melanesia) were resolved w
ith phenetic, parsimony, and likelihood analytical procedures. Seven p
hylogenetic clusters of STLV-I were resolved with the most primitive (
deeply rooted) divergence involving several STLV-I strains from Asian
primate species. Combined analysis of HTLV-I and STLV-I revealed that
neither STLV-I clusters nor HTLV-I clusters recapitulated host species
specificity; rather, multiple clades from the same species were close
r to clades from other species than to each other. We interpret these
evolutionary associations as support for the occurrence of multiple di
screte interspecies transmissions of ancestral viruses, between primat
e species (including human) that led to recognizable phylogenetic clad
es that persist in modern species. Geographic concordance of divergent
host species that harbor closely related viruses reinforces that phys
ical feasibility for hypothesized interspecies virus transmission in t
he past and in the present.