We describe a new method of gene cloning by complementation of mutant
alleles which obviates the need for construction of a gene library in
a plasmid vector in vitro and its amplification in Escherichia coli. T
he method involves simultaneous transformation of mutant strains of th
e fungus Aspergillus nidulans with (i) fragmented chromosomal DNA from
a donor species and (ii) DNA of a plasmid without a selectable marker
gene, but with a fungal origin of DNA replication ('helper plasmid').
Transformant colonies appear as the result of the joining of chromoso
mal DNA fragments carrying the wild-type copies of the mutant allele w
ith the helper plasmid. Joining may occur either by ligation (if the h
elper plasmid is in linear form) or recombination (if it is cccDNA). T
his event occurs with high efficiency in vivo, and generates an autono
mously replicating plasmid cointegrate. Transformants containing Penic
illium chrysogenum genomic DNA complementing A. nidulans niaD, nirA an
d argB mutations have been obtained. While some of these cointegrates
were evidently rearranged or consisted only of unaltered replicating p
lasmid, in other cases plasmids could be recovered into E. coli and we
re subsequently shown to contain the selected gene. The utility of thi
s ''instant gene bank'' technique is demonstrated here by the molecula
r cloning of the P. canescens trpC gene.