We report the cloning of the RNase P RNA genes from the primary aetiol
ogical agent of porcine pneumonia, Mycoplasma hyopneumoniae, and the c
losely related commensal, Mycoplasma flocculare. The monocistronic gen
es each have promoters with AT-rich -35 regions and Rho-independent-li
ke transcription terminators which are retained in the RNase P RNA. Bo
th of these RNase P RNA variants are shown to be catalytically active
in vitro in spite of a low overall GC content (30%). Our results sugge
st a new example of a stable mini-helix in the conserved core of the m
ycoplasmal RNase P RNAs. Deletion of the corresponding structural elem
ent in Escherichia coil RNase P RNA (Mi RNA) generated an RNase P RNA
with an impaired substrate interaction. Displacement of this structura
l element with the mycoplasmal mini-helix resulted in an enzyme with a
phenotype similar to that of wild-type M1 RNA. In addition, this stru
ctural element is important for lead ion-induced cleavage at specific
sites in M1 RNA.