Gn. Parkinson et al., CRYSTAL-STRUCTURE AND NMR CONFORMATION OF A CYCLIC PSEUDOTETRAPEPTIDECONTAINING URETHANE BACKBONE LINKAGES, Biopolymers, 34(3), 1994, pp. 403-414
Urethane bonds, derived from the hydroxyl group of the tyrosine side c
hain, have been investigated as a new type of amide bond mimetic in th
e design of pseudopeptides. The structure of a representative cyclic p
seudotetrapeptide that consists of an - Ala - Tyr(urethane) Ala - Tyr(
urethane) sequence fused into a rigid ring has been studied in the sol
id state by x-ray crystallography and in solution by two-dimensional n
mr techniques. The cyclic pseudotetrapeptide has an oblong shape. The
backbone urethane bonds assume a trans-trans conformation. The carbony
l groups in the ring have an alternating pattern of down, up, down, up
with respect to the average ring plane. Solution nmr studies give obs
erved nuclear Overhauser effects and coupling constants largely in agr
eement with the crystal structure. However, in solution the observed s
tructure is likely to be conformationally averaged, and in the average
d structure, the urethane bond is perpendicular to the plane of the ar
omatic ring of the tyrosine, while in the crystal it is close to this
plane. These differences may be explained by intermolecular hydrogen-b
onding interactions. Four aspects of the conformation of the cyclic ps
eudotetrapeptide were investigated in detail: the tyrosine residue wit
h the attached side-chain urethane bond (the tyrosine-urethane unit),
the conformation of the two urethane backbone linkages, the conformati
on of the two conventional peptide bonds within this unusual ring stru
cture, and the tight turns within the cyclic pseudotetrapeptide. The c
onformation of the tight turns present in the cyclic pseudotetrapeptid
e is very similar to that of a beta-bend of type II. Intermolecular hy
drogen bonding, joining adjacent layers of the cyclic pseudotetrapepti
de in the solid state, resemble a parallel beta-pleated sheet. The pre
sence of these structural motifs in the cyclic pseudotetrapeptide indi
cates that the tyrosine urethane unit may find applications in peptide
and protein engineering. (C) 1994 John Wiley & Sons, Inc.