Analysis of the relationship between the structure of a protein molecu
le and its function often exploits the techniques of gene mutation and
expression in transfected cell lines. This approach has been used ext
ensively in the study of MHC molecules for testing predictions derived
from structural models. Comparison of the functional properties of mu
tant molecules is difficult because MHC molecules interact with both p
eptides and T cell receptors. Functionality is commonly determined in
biological assays which are dependent on T cell recognition of specifi
c peptide/MHC complexes and measure secondary events triggered by T ce
ll activation. In this study four L cell lines transfected with differ
ent combinations of alpha and beta chains from I-A(k) and I-A(u) were
used as antigen-presenting cells to activate two hen egg-white lysozym
e-specific T cell clones. We compared several biological assays, namel
y, T cell proliferation, cytokine production, and cytotoxicity. Differ
ent assays indicated varying degrees of functionality for the same MHC
molecule and thus demonstrated the difficulty in unambiguous interpre
tation of data from complex assays. Furthermore, we detected differenc
es among the transfected lines which appeared unrelated to the express
ion of the introduced MHC genes. (C) 1994 Academic Press, Inc.