Sk. Chunduru et al., METHOTREXATE-RESISTANT VARIANTS OF HUMAN DIHYDROFOLATE-REDUCTASE - EFFECTS OF PHE31 SUBSTITUTIONS, The Journal of biological chemistry, 269(13), 1994, pp. 9547-9555
Substitution of glycine or alanine for phenylalanine 31 in human dihyd
rofolate reductase produces variants that are inhibited less by methot
rexate (MTX) than the previously reported serine variant. The 100 time
s decrease in MTX affinity for the glycine variant is due to slower bi
nding, and to inability of the initial complex to isomerize to a nondi
ssociating conformer. A polar group at position 31 is unnecessary for
resistance, but residues larger than serine confer no resistance. The
glycine variant best fulfills criteria for gene therapy: low K(m) for
H-2folate, high k(cat), and good stability. Although k(cat) is unalter
ed by these mutations, the rate of hydride transfer is greatly decreas
ed. Presteady-state measurements have enabled a complete catalytic sch
eme to be constructed for the glycine variant that predicts observed s
teady-state behavior. The crystal structures of inhibitor complexes of
the serine, alanine, and glycine mutants and of the wild-type enzyme
show that the mutations cause little perturbation of the protein backb
one, of side chains of residues at the active site, or of the bound in
hibitor. A molecule of bound water occupies the space vacated by the p
henyl group.