Ecotin, a serine protease inhibitor found in the periplasm of Escheric
hia coli, has been characterized as an extremely potent anticoagulant
and reversible tight-binding inhibitor of human factor Xa (FXa). The e
cotin gene was cloned by PCR, highly expressed in E. coli, and purifie
d from the E. coli periplasm. The binding of ecotin to FXa was stoichi
ometric with an equilibrium dissociation constant K(i) of 54 pM. The a
ssociation rate constant was 1.35 X 10(6) M-1 s-1, and the dissociatio
n rate constant, measured in the presence of human leukocyte elastase
(HLE) to prevent reassociation of ecotin with FXa, was 6.5 X 10(-5) s-
1. Ecotin prolonged clotting time ca. 10-fold at 0.3 muM and at 2 muM
in activated partial thromboplastin time and prothrombin time assays,
respectively. Ecotin did not effectively inhibit the human plasma prot
eases thrombin, tissue factor-factor VIIa, factor XIa, activated prote
in C, plasmin, or tissue plasminogen activator (t-PA); however, it did
potently inhibit factor XIIa, plasma kallikrein, HLE, and bovine tryp
sin and chymotrypsin. Coincubation of ecotin and FXa at 10 muM each re
sulted in a (ecotin)2.(FXa)2 complex as determined by gel filtration.
Dimerization of ecotin alone was measured by fluorescence titration wh
ich yielded a K(d) of ca. 390 nM. FXa cleaved ecotin slowly at pH 4.0
between M84 and M85. Replacement of the P1 Met84 residue with Arg and
Lys led to FXa inhibitors with K(i) values of 11 and 21 pM, respective
ly. The P1 Arg and Lys mutants also significantly inhibited thrombin,
factor XIa, activated protein C, plasmin, factor XIIa, kallikrein, and
bovine trypsin and chymotrypsin but did not inhibit tissue factor-fac
tor VIIa, t-PA, or HLE.