Background: Picornaviruses are responsible for a wide range of mammali
an diseases and, in common with other RNA viruses, show considerable a
ntigenic variation. Foot-and-mouth disease viruses (FMDVs) constitute
one genus of the picornavirus family and are classified into seven ser
otypes, each of which shows considerable intratypic variation. This an
tigenic variation leads to continuing difficulties in controlling the
disease. To date the structure of only one serotype, O, has been repor
ted. Results: The three-dimensional structure of a serotype C (isolate
C-S8c1) FMDV, has been determined crystallographically at 3.5 angstro
m resolution. The main chain conformation of the virion is very simila
r to that of type O1 virus. The immunodominant G-H loop of VP1, the pr
esumed site of cell attachment, is disordered in both types of virus i
ndicating a functional role for flexibility of this region. There are
significant changes in the structure of other antigenic loops and in s
ome internal regions involved in protomer-protomer contacts, including
the entire amino-terminal portion of VP2, described here for the firs
t time for a picornavirus. Antigenic sites have been identified by gen
etic and peptide mapping methods, and located on the capsid. The data
reveal a major new discontinuous antigenic site (site D) which is loca
ted near to the three-fold axis and involves residues of VP1, VP2 and
VP3 which lie adjacent to each other on the capsid. Conclusion: In FMD
V type C, amino acid substitutions seen in mutants that are resistant
to neutralization by monoclonal antibodies (MAbs) map to predominantly
surface-oriented residues with solvent-accessible side-chains not inv
olved in interactions with other amino acids, whereas residues which a
re accessible but not substituted are found to be more frequently invo
lved in protein-protein interactions. This provides a molecular interp
retation for the repeated isolation of the same amino acid substitutio
ns in MAb-resistant variants, an observation frequently made with RNA
viruses. This first comparison of two FMDV serotypes shows how subtle
changes at antigenic sites are sufficient to cause large changes in an
tigenic specificity between serotypes.