We have investigated the fluorescence profiles of four common pathogen
s: S. pneumoniae, S. aureus, M. catarrhalis, and H. influenzae. The st
eady-state auto fluorescence spectra of bacteria are measured as a fun
ction of the incident light from 200 to 700 rum. The spectra for each
bacterium are combined into a fluorescence profile or fluorescence fin
ger print. Each bacterium produces a unique in vitro fluorescence prof
ile when measured in a saline suspension. The profiles are reproducibl
e. Suspensions of a bacterial strain, where the identification is not
known, can be correctly matched to a small library of previously measu
red fluorescence profiles using a linear least-squares fitting algorit
hm. In addition, we have measured the fluorescence and absorption spec
trum of the tympanic membrane removed from a chinchilla. The optical p
roperties of the tympanic membrane and the least-squares identificatio
n process form precept for a non-invasive, fluorescence based bacteria
l diagnosis technique to be used in otitis media. (C) 1994 Wiley-Liss,
Inc.