Alterations in microsatellite sequences characterize hereditary nonpol
yposis colorectal cancer. This microsatellite instability is due in so
me kindreds to a germline mutation of the mismatch repair gene hMSH2 o
n chromosome 2p. Although microsatellite alterations have been reporte
d in other hereditary nonpolyposis colorectal cancer-associated tumors
including endometrial and gastric cancers, such changes were not dete
cted in most other major neoplasms. We found that 15 of 33 (45%) prima
ry small cell lung cancers, tumors not found in the hereditary nonpoly
posis colorectal cancer syndrome, displayed alterations of microsatell
ite loci which consisted of deletions or expansions of (CA)(n) dinucle
otide repeats. In 8 of these 15 neoplasms, microsatellite instability
was detected in more than 10% of all tested alleles. However, small ce
ll lung cancers that revealed instability contained widespread allelic
loss and had a uniformly poor prognosis. These results expand conside
rably the known spectrum of tumors with microsatellite instability.