N. Bernard et al., D-2-HYDROXY-4-METHYLVALERATE DEHYDROGENASE FROM LACTOBACILLUS-DELBRUECKII SUBSP BULGARICUS .2. MUTAGENIC ANALYSIS OF CATALYTICALLY IMPORTANT RESIDUES, European journal of biochemistry, 244(1), 1997, pp. 213-219
Five residues involved in catalysis and coenzyme binding have been ide
ntified in D-2-hydroxy-4-methylvalerate dehydrogenase from Lactobacill
us delbrueckii subsp. bulgaricus by using biochemical and genetical me
thods. Enzyme inactivation with diethylpyrocarbonate indicated that a
single histidine residue was involved in catalysis. Since H296 is the
only conserved histidine in the whole family of NAD-dependent D-2-hydr
oxyacid dehydrogenases, we constructed the H296Q and H296S mutants and
showed that their catalytic efficiencies were reduced 10(5)-fold comp
ared with the wild-type enzyme. This low residual activity was shown t
o be insensitive to diethylpyrocarbonate. Taken together these data de
monstrate that H296 is responsible for proton exchange in the redox re
action. Two acidic residues (D259 and E264) were candidates for mainta
ining H296 in the protonated state and their roles were examined by mu
tagenesis. The D259N and E264Q mutant enzymes both showed similar and
large reductions in their k(cat)/K-m ratios (200-800-fold, depending o
n pH), indicating that either D259 or E264 (or both) could partner H29
6. The conserved R235 residue was a candidate for binding the alpha-ca
rboxyl group of the substrate and it was changed to lysine. The R235K
mutant showed a 104-fold reduced k(cat)/K-m due to both an increased K
-m and a reduced k(cat) for 2-oxo-4-methylvalerate. Thus R235 plays a
role in binding the substrate carboxylate similar to R171 in the L-lac
tate dehydrogenases. Finally, we constructed the H205Q mutant to test
the role of this partially conserved histidine residue (in 10/13 enzym
es of the family). This mutant enzyme displayed a 7.7-fold increased k
(cat) and a doubled catalytic efficiency at pH 5, was as sensitive to
diethylpyrocarbonate as the wildtype but showed a sevenfold increased
K-m for NADH and a 100-fold increase in K-d for NADH together with 10-
30-fold lower substrate inhibition. The transient kinetic behaviour of
the H205Q mutant is as predicted from our previous study on the enzym
atic mechanism of D-2-hydroxy-4-methylvalerate dehydrogenase which sho
wed that coenzyme binding is highly pH dependent and indicated that re
lease of the oxidised coenzyme is a significant component of the rate-
limiting processes in catalysis at pH 6.5.