HEME PROTEIN DYNAMICS STUDIED BY PHOSPHORESCENCE OF AN EXTERNAL PHOSPHORESCENT PROBE MOLECULE

Citation
S. Beckham et al., HEME PROTEIN DYNAMICS STUDIED BY PHOSPHORESCENCE OF AN EXTERNAL PHOSPHORESCENT PROBE MOLECULE, Archives of biochemistry and biophysics, 310(2), 1994, pp. 440-447
Citations number
56
Categorie Soggetti
Biology,Biophysics
ISSN journal
00039861
Volume
310
Issue
2
Year of publication
1994
Pages
440 - 447
Database
ISI
SICI code
0003-9861(1994)310:2<440:HPDSBP>2.0.ZU;2-D
Abstract
The rate constant for quenching, k(q), of the phosphorescence of 6-bro mo-2-naphthyl sulfate (BNS) by cytochromes c, cytochrome c peroxidase, catalase, and myoglobin has been measured as a function of temperatur e and solvent viscosity. In aqueous solution at pH 7.0 for cytochromes c and myoglobin the value of k(q) is nearly equal to the rate constan t for diffusional intermolecular contact, which is estimated from the value of k(q) for microperoxidase-11. For cytochrome c peroxidase and catalase K-q is at least 350 times smaller than the rate of diffusiona l quenching, which shows that quenching of BNS phosphorescence occurs predominantly over the short distance between donor and acceptor. The mechanism for cytochrome c and myoglobin is found not to involve stati c quenching, deep penetration of BNS into the globin, or unfolding of the protein to allow contact between hems and BNS. It is concluded tha t quenching occurs by interaction of BNS with the exposed hems edge an d by surface insertion of BNS into the protein to a depth sufficient f or quenching by the unexposed heme. The effect of rapid-diffusional en hancement on k(q) is small. From a comparison of the results for the h ems proteins, a model emerges that describes cytochrome c and myoglobi n as having dynamic surfaces. Sufficient fluctuations persist to allow penetration of polyatomic probe molecules into the protein matrix, bu t the dynamics and/or interior microenvironment acts to increase resis tance with increasing depth of penetration. (C) 1994 Academic Press, I nc.