CONFORMATIONAL ISOMERISM OF THE HOST AS A FACTOR IN MOLECULAR RECOGNITION IN HOST-GUEST INCLUSION COMPLEXES - EXAMPLE OF TRIS(5-ACETYL-3-THIENYL)METHANE
Fh. Herbstein, CONFORMATIONAL ISOMERISM OF THE HOST AS A FACTOR IN MOLECULAR RECOGNITION IN HOST-GUEST INCLUSION COMPLEXES - EXAMPLE OF TRIS(5-ACETYL-3-THIENYL)METHANE, Acta crystallographica. Section B, Structural science, 53, 1997, pp. 168-175
The tripod molecule tris(5-acetyl-3-thienyl)methane (TATM) is a flexil
e molecule, i.e. one that can occur in many conformationally isomeric
states (conformers), which forms host-guest inclusion complexes with a
large variety of guests (solvents). Some 40-odd different types of gu
est have been reported to form inclusion complexes. Five different typ
es of crystal structure (all racemic), with nine different guests, hav
e been reported in the literature and structural information is availa
ble for 17 crystallographically independent TATM molecules; most of th
e guests are disordered. Our analysis of this (substantial but, nevert
heless, incomplete) database shows that each group of crystallographic
ally isomorphous structures contains a particular TATM conformer with
characteristic torsion angles about the bonds between methane carbon a
nd the three thienyl rings (tau(1), tau(2) and tau(3)); the range of t
orsion angles in a particular structural group does not exceed 10 degr
ees. Conformers are in addition distinguished via the stereochemistry
of the acetyl group; there are approximately equal numbers of examples
with carbonyl oxygen syn or anti to ring sulfur, intermediate conform
ations not being found. So far three different types of conformer have
been encountered for the TATM molecule considered as an entity. A nec
essary condition for the occurrence of a particular conformer type is
that the torsion angles tau(1), tau(2) and tau(3) are such that ring h
ydrogens should not approach more closely than (say) 2.4 Angstrom, but
this is not sufficient as considerably larger distances are found in
some conformer types. Crystallization of the inclusion complex from a
particular solvent can be envisaged to occur as follows. The TATM solu
tion will contain a Boltzmann distribution of host conformers, the dis
tribution depending on temperature but not on the nature of the solven
t. Under suitable temperature and solubility conditions, the solvent w
ill crystallize together with the appropriate conformer to form the in
clusion complex-nuclei formed at this recognition stage, then grow int
o crystallites of the inclusion complex. The perturbed Boltzmann distr
ibution (depleted in appropriate conformer) will continuously revert t
o its equilibrium form by conversion of the non-appropriate into the a
ppropriate conformer as the crystallization proceeds.