RNA editing post-transcriptionally modifies several mRNAs from the max
icircle of kinetoplastid parasites by addition and removal of uridine
residues. We report here that maxicircle CR5 transcripts of Trypanosom
a brucei are edited in two domains separated by an eight nucleotide se
quence that remains unedited. The large 5' domain is edited to a conse
nsus sequence while the smaller 3' domain is edited to multiple final
sequences. In all, 205 - 217 Us are inserted and 13 - 16 encoded uridi
nes are deleted from the CR5 mRNA, producing a mature transcript 75 -
80% larger than the unedited transcript. The edited RNAs predict small
, highly hydrophobic proteins. The carboxy terminal 15 - 30% of these
predicted proteins have multiple different amino acid sequences as a r
esult of the variable edited 3' mRNA sequence, but these fall into two
families of sequence. Limited amino acid sequence and hydrophobicity
profile similarities suggest that the protein encoded by edited CR5 mR
NA may be a subunit of NADH dehydrogenase.