Proteins extracted from five soybean cultivars were separated by rever
sed-phase (RP) and size exclusion (SE) high performance liquid chromat
ography (HPLC). A RP-HPLC method was developed that permits protein se
paration of nondefatted flours from soybean clutivars. RP-HPLC showed
that protein of these cultivars could be classified into two groups, o
ne of which contained intermediate component peaks under identical con
ditions. Genetically closely related cultivars exhibited only small di
fferences in their RP-HPLC chromatograms. Size exclusion high performa
nce liquid chromatography (SE-HPLC) resolved extracts of nondefatted f
lours from various soybean cultivars into six common peaks which accou
nted for 80 to 94% of the total peak area. Soybean cultivars were prim
arily identified by the percent area of their fifth peak (fraction F5)
which had the highest variability of the total peak area. Seed protei
n of the cultivars was closely related with the area percent of peak F
2 (r = 0.91). SE-HPLC proved to be a rapid one step quantitative metho
d with potential for assessing soybean cultivars on the basis of prote
in content.