Three closely related rhombohedral crystal structures of human annexin
V have been analysed and compared: a low-calcium, a high-calcium and
an ytterbium-soaked crystal. The occupancy of the calcium sites increa
ses at higher calcium concentrations, but the calcium is removed rathe
r than replaced during soaking in the ytterbium solution. Instead, oth
er sites are substituted at high calcium concentrations as well as in
the presence of ytterbium. Furthermore, a new site is revealed in the
ytterbium-soaked crystal which may give a clue to the mechanism of con
formational change that takes place in the third domain of annexin V i
n the presence of very high calcium concentrations and of phospholipid
s.