Molecular studies of late embryogenesis and seed development have emph
asized differential gene expression as a means of identifying discrete
stages of embryogenesis. Little has been done to identity factors tha
t regulate the length of a given developmental stage or the degree of
overlap between adjacent developmental programs. We designed a genetic
screen to identify mutations that disrupt late embryo development in
Arabidopsis without loss of hormonal responses. One such mutation, fus
ca3 (fus3), alters late embryo functions, such as the establishment of
dormancy and desiccation tolerance, and reduces storage protein level
s. fus3 cotyledons bear trichomes, and their ultrastructure is similar
to that of leaf primordia. Immature fus3 embryos enter germinative de
velopment, and the shoot apical meristems develop leaf primordia befor
e seed desiccation begins. The cotyledons resemble leaf primordia, yet
retain some cotyledon characteristics; thus, cotyledon- and leaf-spec
ific functions are expressed simultaneously. Together, these observati
ons are consistent with a heterochronic interpretation of the fus3 mut
ation.