SYSTEMS-ANALYSIS OF YEAST GYLCOLYSIS USING PERTURBATIONS OF EXTERNAL PH - PHYSIOLOGICAL-PARAMETERS, NONPARAMETRIC ANALYSIS, AND GENERAL-PROPERTIES OF THE SYSTEM DYNAMICS
Ka. Rinast et al., SYSTEMS-ANALYSIS OF YEAST GYLCOLYSIS USING PERTURBATIONS OF EXTERNAL PH - PHYSIOLOGICAL-PARAMETERS, NONPARAMETRIC ANALYSIS, AND GENERAL-PROPERTIES OF THE SYSTEM DYNAMICS, Biosystems, 32(3), 1994, pp. 211-221
A global systems analysis approach to yeast glycolysis is presented. S
tarting from a high flux steady state of anaerobic glycolysis rapid ch
anges of external pH are applied. The dynamics of the transduction of
the pH signal to the in vivo fluorescence of reduced pyridine nucleoti
des are investigated. Physiological studies indicate no significant in
fluence of external pH on glycolytic flux and energy charge, but stati
onary concentrations of metabolites are increased after increasing the
external pH from 5-7 particularly in the distal part of the glycolyti
c chain. Most of the changes in reduced pyridine fluorescence are due
to glycolytically accessible NADH. As a first stage of system analytic
investigations the premises for the approach were tested. The dynamic
properties of the system are stable and the response is linear with r
espect to the input amplitude. The dynamic properties of the system de
pend on the state of adaptation to a certain external pH. The non-para
metric model derived from single step experiments was used to correctl
y predict the response to pulses of variable duration. This indicates
that the linear macroscopic approach to systems analysis with pH as in
put is applicable. The dynamics of the system response includes strong
ly damped oscillatory components. Their period lengths are similar to
those found with temperature inputs and with the switching from low to
high glycolytic flux under anaerobic conditions. This indicates that
the three different signals may trigger common regulatory interactions
. The order of the signal transduction process, indicating the number
of basic processes involved, can be estimated to be 4 or higher.