PATTERN-RECOGNITION AND CLASSIFICATION OF IMAGES OF BIOLOGICAL MACROMOLECULES USING ARTIFICIAL NEURAL NETWORKS

Citation
R. Marabini et Jm. Carazo, PATTERN-RECOGNITION AND CLASSIFICATION OF IMAGES OF BIOLOGICAL MACROMOLECULES USING ARTIFICIAL NEURAL NETWORKS, Biophysical journal, 66(6), 1994, pp. 1804-1814
Citations number
23
Categorie Soggetti
Biophysics
Journal title
ISSN journal
00063495
Volume
66
Issue
6
Year of publication
1994
Pages
1804 - 1814
Database
ISI
SICI code
0006-3495(1994)66:6<1804:PACOIO>2.0.ZU;2-M
Abstract
The goal of this work was to analyze an image data set and to detect t he structural variability within this set. Two algorithms for pattern recognition based on neural networks are presented, one that performs an unsupervised classification (the self-organizing map) and the other a supervised classification (the learning vector quantization). The a pproach has a direct impact in current strategies for structural deter mination from electron microscopic images of biological macromolecules . In this work we performed a classification of both aligned but heter ogeneous image data sets as well as basically homogeneous but otherwis e rotationally misaligned image populations, in the latter case comple tely avoiding the typical reference dependency of correlation-based al ignment methods. A number of examples on chaperonins are presented. Th e approach is computationally fast and robust with respect to noise. P rograms are available through ftp.