Molecular markers linked to loci of interest can be used for fine mapp
ing a particular area of a genome or for marker-assisted selection. We
present an approach for screening individual plants with polymorphic
markers that facilitates phenotyping in large populations. Polymorphic
DNA fragments, amplified by PCR, are labelled with digoxigenin and us
ed as probes on slot blots of amplified DNA from the individual plants
to be tested. DNA is obtained by a simple two-tube purification metho
d. The colorimetric detection of alleles on the blots is more reliable
, and more amenable to automation, than conventional staining of elect
rophoresis gels.