The role of the carboxyl-terminal portion of the alpha chains of fibri
n (alpha C domains) in clot formation was investigated by transmission
and scanning electron microscopy and turbidity studies of clots made
from preparations of molecules missing one or both of these domains. H
ighly purified and entirely clottable preparations of bovine fragment
X monomer, one containing primarily molecules missing a single alpha C
domain (fragment X(1)) and the other consisting of molecules missing
both alpha C domains (fragment X(2)), were used for these experiments.
These preparations were characterized by various methods, including t
he complete determination of the amino- and carboxyl-termini of all pe
ptides and fragments. These preparations formed clots on dilution to n
eutral pH. In all cases, clots observed by either scanning or transmis
sion electron microscopy were made up of a branched network of fibers,
similar to those formed by thrombin treatment of intact fibrinogen, s
uggesting that the alpha C domains are not necessary for protofibril a
nd fiber formation or branching. However, both the fiber and clot stru
cture varied with the different fractions, indicating that the alpha C
domains do participate in polymerization. The rate of assembly, as in
dicated by the lag period and maximum rate of turbidity increase, as w
ell as the final turbidity, was decreased with removal of the alpha C
domains, suggesting that they accelerate polymerization. Preparations
of isolated alpha C fragment added to fibrin monomer have striking eff
ects on the turbidity curves, showing a decrease in the rate of polyme
rization in a dose-dependent manner but not complete inhibition. Elect
ron microscopy of fibrin monomer desA molecules at neutral pH showed t
hat most of the alpha C domains, like those in fibrinogen, remain asso
ciated with the central region. Thus, it appears that normally with th
rombin cleavage of fibrinogen the effects of the interactions of alpha
C domains observed here will be most significant for lateral aggregat
ion.