Membrane-bound sites of cytochrome P-450 2B4 (LM2) were determined by
means of two different methods, photoactivated binding of membrane pho
spholipids to the protein and epitope mapping by antibodies. Phospholi
pids bearing photoreactive labels at different distances from the thei
r polar 'head' were used in the former case. Phosphatidylcholine label
led at the apolar end of the fatty acid chain bound only to the N-term
inal region of the hemoprotein. Other phospholipids labelled nearer to
the head group bound not only to the N-terminus but also to the segme
nts 273-314 and 427-491. Epitope mapping of the domain next to the N-t
erminus (residues 21-119) of the isolated hemoprotein was performed. w
ith the help of a peptide-scanning method, a programmable peptide synt
hesis on pins followed by ELISA testing with the polyclonal antiserum
against cytochrome P-450 2B4. This domain was shown to possess a consi
derable density of sites with high antigenic activity. No membrane-pen
etrating part of this domain was found except for the fragment 1-21. A
model of structure of P-450 2B4 was computed by comparison with the s
tructure of cytochrome P-450(cam) on the basis of an alignment of 47 c
ytochromes P-450 with the former hemoprotein. Major parts of the prote
in sequences photoreacting with the phospholipid probes, but not the a
ntibody-reactive epitopes of the region 21-119, are located at the mem
brane-facing side in this model