Many genes on the uni linkage group of Chlamydomonas affect the basal
body/flagellar apparatus. Among these are five FLA genes, whose mutati
ons cause temperature-sensitive defects in flagellar assembly. We pres
ent the molecular analysis of a gene which maps to fla10 and functiona
lly rescues the fla10 phenotype. Nucleotide sequencing revealed that t
he gene encodes a kinesin-homologous protein, KHP1. The 87-kD predicte
d KHP1 protein, like kinesin heavy chain, has an amino-terminal motor
domain, a central alpha-helical stalk, and a basic, globular carboxy-t
erminal tail. Comparison to other kinesin superfamily members indicate
d striking similarity (64% identity in motor domains) to a mouse gene,
KIF3, expressed primarily in cerebellum. In synchronized cultures, th
e KHP1 mRNA accumulated after cell division, as did flagellar dynein m
RNAs. KHP1 mRNA levels also increased following deflagellation. Polycl
onal antibodies detected KHP1 protein in Western blots of purified fla
gella and axonemes. The protein was partially released from axonemes w
ith ATP treatment, but not with AMP-PNP. Western blot analysis of axon
emes from various motility mutants suggested that KHP1 is not a compon
ent of radial spokes, dynein arms, or the central pair complex. The qu
antity of KHP1 protein in axonemes of the mutant fla10-1 was markedly
reduced, although no reduction was observed in two other uni linkage g
roup mutants, fla9 and fla11. Furthermore, fla10-1 was rescued by tran
sformation with KHP1 genomic DNA. These results indicate that KHP1 is
the gene product of FLA10 and suggest a novel role for this kinesin-re
lated protein in flagellar assembly and maintenance.