C. Roselli et al., DETECTION OF A YB3-SITE IN REGENERATED BACTERIORHODOPSIN THAT IS COORDINATED WITH THE PROTEIN AND PHOSPHOLIPID HEAD GROUPS( BINDING), Proceedings of the National Academy of Sciences of the United Statesof America, 93(25), 1996, pp. 14333-14337
Near infrared Yb3+ vibronic sideband spectroscopy was used to characte
rize specific lanthanide binding sites in bacteriorhodopsin (bR) and r
etinal free bacteriorhodopsin (bO). The VSB spectra for deionized bO r
egenerated with a ratio of 1:1 and 2:1 ion to bO are identical. Applic
ation of a two-dimensional anti-correlation technique suggests that on
ly a single Yb3+ site is observed. The Yb3+ binding site in bO is obse
rved to consist of PO2- groups and carboxylic acid groups, both of whi
ch are bound in a bidentate manner. An additional contribution most li
kely arising from a phenolic group is also observed. This implies that
the ligands for the observed single binding site are the lipid head g
roups and amino acid residues. The vibronic sidebands of Yb3+ in deion
ized bR regenerated at a ratio of 2:1 ion to bR are essentially identi
cal to those in bO. The other high-affinity binding site is thus eithe
r not evident or its fluorescence is quenched, A discussion is given o
n the difference in binding of Ca2+ (or Mg2+) and lanthanides in phosp
holipid membrane proteins.