The three-dimensional structure of the catalytic domain of stromelysin
-1 complexed with an N-carboxyl alkyl inhibitor has been determined by
NMR methods. The global fold consists of three helices, a five strand
ed beta-sheet and a methionine located in a turn near the catalytic hi
stidines, classifying stromelysin-1 as a metzincin. Stromelysin-1 is u
nique in having two independent zinc binding sites: a catalytic site a
nd a structural site. The inhibitor binds in an extended conformation.
The S1' subsite is a deep hydrophobic pocket, whereas S2' appears sha
llow and 53' open.