J. Hempel et al., UDP-GLUCOSE DEHYDROGENASE FROM BOVINE LIVER - PRIMARY STRUCTURE AND RELATIONSHIP TO OTHER DEHYDROGENASES, Protein science, 3(7), 1994, pp. 1074-1080
The primary structure of bovine liver UDP-glucose dehydrogenase (UDPGD
H), a hexameric, NAD(+)-linked enzyme, has been determined at the prot
ein level. The 52-kDa subunits are composed of 468 amino acid residues
, with a free N-terminus and a Ser/Asn microheterogeneity at one posit
ion. The sequence shares 29.6% positional identity with GDP-mannose de
hydrogenase from Pseudomonas, confirming a similarity earlier noted be
tween active site peptides. This degree of similarity is comparable to
the 31.1% identity vs. the UDPGDH from type A Streptococcus. Database
searching also revealed similarities to a hypothetical sequence from
Salmonella typhimurium and to ''UDP-N-acetyl-mannosaminuronic acid deh
ydrogenase'' from Escherichia coli. Pairwise identities between bovine
UDPGDH and each of these sequences were all in the range of similar t
o 26-34%. Multiple alignment of all 5 sequences indicates common ances
try for these 4-electron-transferring enzymes. There are 27 strictly c
onserved residues, including a cysteine residue at position 275, earli
er identified by chemical modification as the expected catalytic resid
ue of the second half-reaction (conversion of UDP-aldehydoglucose to U
DP-glucuronic acid), and 2 lysine residues, at positions 219 and 338,
one of which may be the expected catalytic residue for the first half-
reaction (conversion of UDP-glucose to UDP-aldehydoglucose). A GXGXXG
pattern characteristic of the coenzyme-binding fold is found at positi
ons 11-16, close to the N-terminus as with ''short-chain'' alcohol deh
ydrogenases. Because the enzyme combines functionalities of alcohol an
d aldehyde dehydrogenases, it was also of interest to search specifica
lly for other sequence similarities to either of these 2 enzymes, as w
ell as to histidinol dehydrogenase, another 4-electron-transferring de
hydrogenase, but none were found.