K. Negishi et H. Hayatsu, THE FLUORESCENCE PROPERTY OF DINUCLEOSIDE MONOPHOSPHATES CONTAINING ETHENOADENOSINE AND 5,6-DIHYDROURIDINE DERIVATIVES, Nucleosides & nucleotides, 13(6-7), 1994, pp. 1551-1555
The role of neighboring nucleotides in the quenching of ethenoadenosin
e fluorescence as a constituent of dinucleotides is studied. Bisulfite
reacts with the uracil moiety of dinucleoside monophosphate, Up epsil
on A to yield an addition product, 5,6-dihydro-6-sulfouridylyl-ethenoa
denosine. During the course of the reaction, the fluorescence of ethen
oadenosine increases up to 8-fold, to the same intensity as that of mo
nomeric ethenoadenosine. 5,6-Dihydrouridylyl-ethenoadenosine has a sim
ilar fluorescence intensity. These results form evidence that the role
played by a neighboring nucleotide in the quenching of ethenoadenosin
e fluorescence in oligo- or polynucleotides is to generate an aromatic
-aromatic interaction between these bases.