Hc. Harpending, SIGNATURE OF ANCIENT POPULATION-GROWTH IN A LOW-RESOLUTION MITOCHONDRIAL-DNA MISMATCH DISTRIBUTION, Human biology, 66(4), 1994, pp. 591-600
A mismatch distribution is a tabulation of the number of pairwise diff
erences among all DNA sequences in a sample. In a population that has
been stationary for a long time these distributions from nonrecombinan
t DNA sequences become ragged and erratic, whereas a population that h
as been growing generates mismatch distributions that are smooth and h
ave a peak. The position of the peak reflects the time of the populati
on growth. The signature of an ancient population expansion is apparen
t even in the low-resolution mtDNA typings described by Merriwether et
al. (1991). The smoothness of the mismatch distribution, an indicator
of population expansion, is hardly affected by population structure,
whereas mean sequence divergence increases in a pooled sample from hig
hly isolated subpopulations.