COMPUTATIONAL CONFORMATIONAL-ANALYSIS OF NEURAL MEMBRANE-LIPIDS - DEVELOPMENT OF FORCE-FIELD PARAMETERS FOR PHOSPHOLIPIDS USING SEMIEMPIRICAL MOLECULAR-ORBITAL CALCULATIONS
Ay. Jin et al., COMPUTATIONAL CONFORMATIONAL-ANALYSIS OF NEURAL MEMBRANE-LIPIDS - DEVELOPMENT OF FORCE-FIELD PARAMETERS FOR PHOSPHOLIPIDS USING SEMIEMPIRICAL MOLECULAR-ORBITAL CALCULATIONS, Canadian journal of chemistry, 72(6), 1994, pp. 1596-1604
MM2 force field parameters for phospholipids were developed. These par
ameters - MM2(Lipid) - were employed in energy-minimization calculatio
ns (using crystal structures as starting conformations) on four phosph
olipids: dimyristoylphosphatidylglycerol, dilauroylphosphatidyl-N,N-di
methylamine, 1,2-dilauroyl-dl-phosphatidylethanolamin and deoxylysopho
sphatidylcholine. After minimization, slight conformational changes we
re seen in the hydrocarbon chains, while greater change was seen at th
e head group. The diacylglycerol backbone of the energy-minimized stru
ctures exhibited conformations corresponding to experimentally observe
d conformations. The energy minimization of a randomly and significant
ly altered geometry of 1,2-dilauroyl-dl-phosphatidylethanolamine resul
ted in a head group conformation that closely agreed with ab initio th
eoretical calculations. The utility of AM1 in molecular mechanics para
meterization was demonstrated.