RECENT TRANSLOCATION OF VARIABLE AND DIVERSITY SEGMENTS OF THE HUMAN-IMMUNOGLOBULIN HEAVY-CHAIN FROM CHROMOSOME-14 TO CHROMOSOME-15 AND CHROMOSOME-16

Citation
H. Nagaoka et al., RECENT TRANSLOCATION OF VARIABLE AND DIVERSITY SEGMENTS OF THE HUMAN-IMMUNOGLOBULIN HEAVY-CHAIN FROM CHROMOSOME-14 TO CHROMOSOME-15 AND CHROMOSOME-16, Genomics, 22(1), 1994, pp. 189-197
Citations number
38
Categorie Soggetti
Genetics & Heredity
Journal title
ISSN journal
08887543
Volume
22
Issue
1
Year of publication
1994
Pages
189 - 197
Database
ISI
SICI code
0888-7543(1994)22:1<189:RTOVAD>2.0.ZU;2-3
Abstract
We studied the organization and origin of three orphon regions, V-H-F, D-5-a, and D-5-b, of the human immuno globulin heavy-chain gene using yeast artificial chromo somes. V-H-F and two D-5 regions were mapped to chromosome bands 16p11 and 15q11-q12, respectively, by using human/ rodent somatic cell hybrids and fluorescence in situ hybridization. No D-5 segments were found on chromosome 14, in contradiction to previou s reports. The V-H-F region consists of 7 V-H segments and encompasses 160 kb of DNA. A cluster of V-H segments homologous to the V-H-F regi on orphons was found in the region 245-430 kb (V2-26 to V3-11) upstrea m of the J(H) cluster on chromosome 14. Comparison of V-H sequences be tween the V-H-F and the chromosome 14 loci indicates that the transloc ation of the V-H-F region took place, at the earliest, 20 x 10(6) year s ago. The D-5-a and D-5-b regions were obtained in two independent co ntigs. The former contains only D segments in 140 kb of DNA, while the latter carries 3 V-H segments downstream of D segments in 110 kb of D NA. V-54, one of these V-H orphon segments, is about 95% homologous to V1-18, which is located within the putative ancestor of the V-H-F reg ion on chromosome 14. Furthermore, the region detected by two DNA prob es flanking the V-54 Segment was found only in the proximity of V1-18 within the 0.8-Mb V-H region on chromosome 14. These results suggest t hat the two orphon loci on chromosomes 15 and 16 may have been translo cated simultaneously. (C) 1994 Academic Press, Inc.