Tc. Beutler et Wf. Vangunsteren, MOLECULAR-DYNAMICS FREE-ENERGY CALCULATION IN 4 DIMENSIONS, The Journal of chemical physics, 101(2), 1994, pp. 1417-1422
A new method for the calculation of free energy differences by molecul
ar dynamics simulations of molecular systems is presented. The main ch
aracteristic of the method is that the three-dimensional physical spac
e is augmented by a further dimension. This allows the system to circu
mvent energy barriers in three-dimensional space. When simulating phys
ical (three-dimensional) states, the dynamics along the 4th coordinate
is uncoupled from the dynamics described with the original three coor
dinates. In the method presented here, free energy differences between
physical states are determined using pathways leading over states whe
re the dynamics along all four dimensions are coupled. Due to the barr
ier lowering in four dimensions, an increase of efficiency can be expe
cted when low free energy physical states are separated by high barrie
rs. The method is tested by application to an atomic liquid.