C. Narasimhan et al., P-MEVALONII 3-HYDROXY-3-METHYLGLUTARYL-COA LYASE - ELECTRON-PARAMAGNETIC-RESONANCE INVESTIGATION OF THE COPPER-BINDING SITE, Archives of biochemistry and biophysics, 312(2), 1994, pp. 467-473
The copper binding site in Pseudomonas mevalonii 3-hydroxy-3-methylglu
taryl-CoA (HMG-CoA) lyase has been investigated by multifrequency elec
tron spin resonance spectroscopy. Methodology has been developed to in
troduce copper in vitro into the isolated apoenzyme. The X-band EPR of
Cu2+ (mixed isotopes or Cu-63(2+)) introduced in this way is very sim
ilar to the EPR spectra of samples in which copper is introduced durin
g protein expression. g(parallel to) and A(parallel to) values in the
X-band spectra support the prediction of nitrogen ligands to the tight
ly bound copper. In the g(parallel to) region of S-band EPR spectra (m
(I) = -1/2) of lyase-bound Cu-63(2+), superhyperfine interactions due
to nitrogen ligands are observed. Computer simulation with appropriate
g values and A values and strain parameters was used to satisfactoril
y model both the X-band and the S-band spectra. The g(parallel to) val
ue of 2.282 and the A(parallel to) value of 470 MHz are consistent wit
h two nitrogen and two oxygen donor atoms for a square planar type 2 c
opper center. By simulating the m(I) = -1/2 line of the S-band spectru
m, the superhyperfine features could be well modeled. This simulation
approach was also used to distinguish between two and three nitrogen d
onor atoms. Based on the intensity patterns of the superhyperfine line
s and the estimated coupling constants, it is concluded that at least
two (and probably only two) nitrogen donor atoms are liganded to the t
ightly bound copper in HMG-CoA lyase. Additionally, kinetic experiment
s demonstrate that a spin-labeled substrate analog (R(.)CoA) is a comp
etitive inhibitor of HMG-CoA lyase (K-I = 98 mu M). ESR titration expe
riments indicate that R(.)CoA binds to lyase with an equilibrium disso
ciation constant of 103 mu M. Bound spin label exhibits a rotational c
orrelation time, tau(c), of 20 ns, in agreement with the value predict
ed for immobilization on a protein composed of two 32-kDa subunits. (C
) Academic Press, Inc.