The respiration of oxygen, while essential to aerobic organisms for th
e generation of energy, leads to the formation of reactive oxygen inte
rmediates (ROIs) as harmful byproducts. ROIs damage nucleic acids, lip
ids and proteins. Therefore, protective mechanisms against elevated in
tracellular ROI levels, referred to as oxidative stress, have evolved.
These include the activation of transcription factors which elevate t
he expression of protective enzymes. Eukaryotic cells have also evolve
d the ability to specifically generate ROIs following stimulation with
various agents. In these cases, ROIs are used as second messengers to
activate gene expression. Here we will discuss both prokaryotic and e
ukaryotic transcription factors that respond to ROIs. In addition, tra
nscription factors will be described that are activated by either expo
sure to antioxidants, which reduce the intracellular ROI concentration
, or by hypoxia, the absence of oxygen.