Jm. Raaijmakers et al., FREQUENCY OF ANTIBIOTIC-PRODUCING PSEUDOMONAS SPP IN NATURAL ENVIRONMENTS, Applied and environmental microbiology, 63(3), 1997, pp. 881-887
The antibiotics phenazine-1-carboxylic acid (PCA) and 2,4-diacetylphlo
roglucinol (Phl) are major determinants of biological control of soilb
orne plant pathogens by various strains of fluorescent Pseudomonas spp
. In this study, we described primers and probes that enable specific
and efficient detection of a wide variety of fluorescent Pseudomonas s
trains that produce various phenazine antibiotics or Phl. PCR analysis
and Southern hybridization demonstrated that specific genes within th
e biosynthetic loci for Phl and PCA are conserved among various Pseudo
monas strains of worldwide origin, The frequency of Phl- and PCA-produ
cing fluorescent pseudomonads was determined on roots of wheat grown i
n three soils suppressive to take-all disease of wheat and four soils
conducive to take-all by colony hybridization followed by PCR. Phenazi
ne-producing strains were not detected on roots from any of the soils,
However, Phl-producing fluorescent pseudomonads were isolated from al
l three take-all-suppressive soils at densities ranging from approxima
tely 5 x 10(5) to 2 x 10(6) CFU per g of root. In the complementary co
nducive soils, Phl-producing pseudomonads were not detected or were de
tected at densities at least 40-fold lower than those in the suppressi
ve soils. We speculate that fluorescent Pseudomonas spp. that produce
Phl play an important role in the natural suppressiveness of these soi
ls to take-all disease of wheat.