STRUCTURAL FEATURES OF THE BRADYKININ RECEPTOR AS DETERMINED BY COMPUTER-SIMULATIONS, MUTAGENESIS EXPERIMENTS, AND CONFORMATIONALLY CONSTRAINED LIGANDS - ESTABLISHING THE FRAMEWORK FOR THE DESIGN OF NEW ANTAGONISTS
Dj. Kyle, STRUCTURAL FEATURES OF THE BRADYKININ RECEPTOR AS DETERMINED BY COMPUTER-SIMULATIONS, MUTAGENESIS EXPERIMENTS, AND CONFORMATIONALLY CONSTRAINED LIGANDS - ESTABLISHING THE FRAMEWORK FOR THE DESIGN OF NEW ANTAGONISTS, Brazilian journal of medical and biological research, 27(8), 1994, pp. 1757-1779
1. In recent years, two classes of second generation bradykinin recept
or antagonists have been reported. Both are of the general sequence (1
)-Pro(2)-W-3-Gly(4)-X(5)-Ser(6)-Y-7-Z(8)-Arg(9), where W is either Pro
or Hyp, and X is an aromatic or aliphatic side chain-containing amino
acid. Y and Z are unnatural amino acids, presumed to enforce a beta-t
urn structure The de novo design of a non-peptide receptor antagonist
(or the optimization of a lead discovered by random screening) will ul
timately require knowledge about the receptor topology. In the absence
of an experimentally determined structure of the bradykinin-bradykini
n receptor complex, we have attempted to gain insights from other sour
ces. 2. We have synthesized conformationally constrained ligands and c
ompleted extensive computer modeling on the bradykinin receptor. Moreo
ver, using systematic synthetic modifications, we have explored the re
lative importances of selected amide bonds and side chains in second g
eneration peptides and have made a series of C-alpha- and/or N-methyl
substitutions at positions four and five which led to the discovery of
two new cyclic peptide antagonists. 3. Computational simulations led
to a proposed model of bradykinin bound to its receptor which was foun
d to be in good agreement with mutagenesis results. This model led ult
imately to the design and synthesis of aminododecanoyl)(2)-Ser(3)-D-Ti
c(4)-Oic(5)-Arg(6). Consideration of this new lead compound, together
with the extensive structure-activity relationship (SAR) which has bee
n developed for peptide ligands and the receptor, represents a tangibl
e framework for the design of more potent and longer-lasting antagonis
ts of the bradykinin receptor.