Dm. Kehoe et al., 2 10-BP REGIONS ARE CRITICAL FOR PHYTOCHROME REGULATION OF A LEMNA-GIBBA LHCB-GENE PROMOTER, The Plant cell, 6(8), 1994, pp. 1123-1134
Two small regions of the promoter of an Lhcb gene encoding a light-har
vesting chlorophyll alb protein were identified as essential in confer
ring phytochrome responsiveness by using a transient expression assay.
Initially, 5' deletion analysis of cabAB19, an Lhcb2 gene of Lemna, s
howed that sequences within the region from -174 to -104 relative to t
he start of transcription were necessary far phytochrome regulation. I
nternal deletion and substitution mutants were used to demonstrate tha
t no additional phytochrome-responsive regions exist between -1600 and
-174 in this promoter. A 171-bp fragment of the promoter extending fr
om -239 to -69 was sufficient to impart phytochrome responsiveness to
a minimal ubiquitin promoter that was not itself regulated by light. S
pecific binding of Lemna proteins to the region necessary for phytochr
ome responsiveness was demonstrated using in vitro polyacrylamide gel
mobility shift assays and 1,10-phenanthroline copper ion footprinting.
Further analysis of the region from -174 to -104 demonstrated that mu
tations in two separate 10-bp sequences, from -134 to -125 and from -1
14 to -105, could abolish phytochrome responsiveness; thus, there are
two unique regions that are necessary for phytochrome regulation of th
is gene. One of these regions contains a CCAAT motif and the other a G
ATA motif. These motifs are conserved in the promoters of many Lhcb ge
nes and may be important elements in the phytochrome responsiveness of
this gene family.