C. Gooding et al., SMOOTH MUSCLE-SPECIFIC SWITCHING OF ALPHA-TROPOMYOSIN MUTUALLY EXCLUSIVE EXON SELECTION BY SPECIFIC-INHIBITION OF THE STRONG DEFAULT EXON, EMBO journal, 13(16), 1994, pp. 3861-3872
Exons 2 and 3 of alpha-tropomyosin are spliced in a strict mutually ex
clusive manner. Exon 3 is a default choice, being selected in almost a
ll cell types where the gene is expressed. The default selection arise
s from a competition between the two exons, in which the stronger bran
ch point/pyrimidine tract elements of exon 3 win. Exon 2 is selected p
redominantly or exclusively only in smooth muscle cells. We show here
that the basis for the smooth muscle-specific switching of exon select
ion is inhibition of exon 3. Exon 3 is still skipped with smooth muscl
e specificity, even in the absence of exon 2. We have defined two cons
erved sequence elements, one in each of the introns flanking exon 3, t
hat are essential for this regulation. Mutation of either element seve
rely impairs regulated suppression of exon 3. No other exon or intron
sequences appear to be necessary for regulation. We have also demonstr
ated skipping of exon 3 that is dependent upon both regulatory element
s in an in vitro splicing assay. We further show that both splice site
s of exon 3 must be inhibited in a concerted fashion to switch to sele
ction of exon 2. This may relate to the requirement for negative eleme
nts on both sides of the exon.