RNA editing in rat brain has been found to control a determinant of ca
tion flow in lpha-amino-3-hydroxy-5-methyl-4-isoxasolepropionic acid (
AMPA)-gated channels. Here we provide the first evidence that this RNA
editing phenomenon occurs in human brain and is differentially regula
ted. Sequence analysis of human genomic DNA revealed a Q codon (CAG) i
n the putative channel-forming segment of human GluR-2, whereas in the
majority of cDNA clones an R codon (CGG) was found. Examination of ed
iting in various brain tissues revealed differences in the efficiency
of this process. The hippocampus, cerebellum and temporal cortex harbo
ur 100% edited GluR-2, whereas only 72% of substantia nigra, 89% of co
rpus striatum and 96% of fetal cDNAs have been found to be edited. Thi
s new discovery of differential efficiency of RNA editing has importan
t implications in AMPA receptor channel-mediated calcium influx. AMPA
receptors are thought to mediate the majority of the fast excitatory s
ynaptic neurotransmission; the RNA editing process may therefore play
a critical role in normal brain function and development. Dysfunction
of this RNA editing process may have neuropathological consequences an
d could be related to certain neurodegenerative diseases.