S. Bromberg et al., LIGATION ALTERS THE PATHWAY OF UREA-INDUCED DENATURATION OF THE CATALYTIC TRIMER OF ESCHERICHIA-COLI ASPARTATE-TRANSCARBAMYLASE, Protein science, 3(8), 1994, pp. 1236-1244
We have examined the pathway and energetics of urea-induced dissociati
on and unfolding of the catalytic trimer (c(3)) of aspartate transcarb
amylase from Escherichia coli at low temperature in the absence and pr
esence of carbamyl phosphate (CP; a substrate), N-(phosphonacetyl)-L-A
sp (PALA; a bisubstrate analog), and 2 anionic inhibitors, Cl- and ATP
, by analytical gel chromatography supplemented by activity assays and
ultraviolet difference spectroscopy. In the absence of active-site li
gands and in the presence of ATP, c(3) dissociates below 2 M urea into
swollen c chains that then gradually unfold from 2 to 6 M urea with l
ittle apparent cooperativity. Linear extrapolation to 0 M urea of free
energies determined in 3 independent types of experiments yields esti
mates for Delta G(dissociation) at 7.5 degrees C of about 7-10 kcal m(
-1) per interface. Delta G(unfolding) of dissociated chains when model
ed as a 2-state process is estimated to be very small, on the order of
similar to 2 kcal m(-1). The data are also consistent with the possib
ility that the unfolding of the dissociated monomer is a 1-state swell
ing process. In the presence of the ligands CP and PALA, and in the pr
esence of Cl-, c(3) dissociates at much higher urea concentrations, an
d trimer dissociation and unfolding occur simultaneously and apparentl
y cooperatively, at urea concentrations that increase with the affinit
y of the ligand.