Eleven polymorphic DNA markers were mapped to rat Chromosome (Chr) 3 b
y linkage analysis of F-2 progeny of F344/N and LEW/N rat strains. The
markers, including seven genes and four anonymous loci, formed a sing
le linkage group covering approximately 112 cM with the following orde
r: Ptgs1 (prostaglandin G/H synthase I)-D3Arb178-Scn2a (sodium channel
, type II, alpha-polypeptide)-D3Arb1-Cat (catalase)-Bdnf (brain-derive
d neurotrophic factor)-D3Arb219-D3Arb2-Sus2 (seminal vesicle secretion
II protein)-Sdc4 (ryudocan/syndecan4)-Stnl (statin-like protein). Eig
ht of these markers were analyzed for polymorphisms in 14 additional i
nbred rat strains. Three to five alleles were detected for each marker
, suggesting that they are highly polymorphic and useful for genetic m
apping studies with inbred rat strains. Chromosomal syntenic conservat
ion among rats, mice and humans is also discussed.