OBSERVATION OF A STERICALLY UNFAVORABLE SIDE-CHAIN CONFORMATION IN A LEUCYL RESIDUE - CRYSTAL AND MOLECULAR-STRUCTURE OF L-LEUCYL-L-LEUCINE-CENTER-DOT-DMSO SOLVATE

Citation
Sn. Mitra et E. Subramanian, OBSERVATION OF A STERICALLY UNFAVORABLE SIDE-CHAIN CONFORMATION IN A LEUCYL RESIDUE - CRYSTAL AND MOLECULAR-STRUCTURE OF L-LEUCYL-L-LEUCINE-CENTER-DOT-DMSO SOLVATE, Biopolymers, 34(9), 1994, pp. 1139-1143
Citations number
16
Categorie Soggetti
Biology
Journal title
ISSN journal
00063525
Volume
34
Issue
9
Year of publication
1994
Pages
1139 - 1143
Database
ISI
SICI code
0006-3525(1994)34:9<1139:OOASUS>2.0.ZU;2-I
Abstract
The crystal structure of a dipeptide L-leucyl-L-leucine (C12H24N2O3) h as been determined. The crystals are monoclinic, space group P2(1), wi th a = 5.434(4) Angstrom, b = 15.712(7) Angstrom, c = 11.275(2) Angstr om, beta = 100.41(1)degrees, and Z = 2. The crystals contain one molec ule of dimethyl sulfoxide (DMSO) as solvent of crystallization for eac h dipeptide molecule. The structure has been solved by direct methods and refined to a final R index of 0.059 for 920 reflections (sin theta /lambda less than or equal to 0.60 Angstrom(-1)) with I greater than o r equal to 2 sigma (I). The trans peptide unit shows substantial degre e of non-planarity (Delta omega = 14 degrees). The peptide backbone ad opts an extended conformation with torsion angles of psi(1) = 138(1)de grees, omega(1) = 166(1)degrees, phi(2) = -149.3(7)degrees, psi(21), = 164.2(7)degrees, and psi(22) = -15(1)degrees. For the first leucyl re sidue, the side-chain conformation is specified by the torsion angles (1) chi(1) = 176.7(7)degrees, (1) chi(22) = 62(1)degrees, (1) chi(22) = -177.4(8)degrees; the second leucyl residue adopts a sterically unfa vorable conformation with (2) chi(1) = 61(1)degrees, (2) chi(21) = 97( 1)degrees, and (2) chi(22) = -151(1)degrees. The packing involves head -to-tail interaction of peptide molecules and segregation of polar and nonpolar regions. The DMSO molecule is strongly hydrogen bonded to th e terminal NH3+ group. (C) 1994 John Wiley & Sons, Inc.