ASSIGNMENTS, SECONDARY STRUCTURE, GLOBAL FOLD, AND DYNAMICS OF CHEMOTAXIS-Y PROTEIN USING 3-DIMENSIONAL AND 4-DIMENSIONAL HETERONUCLEAR (C-13,N-15) NMR-SPECTROSCOPY
Fj. Moy et al., ASSIGNMENTS, SECONDARY STRUCTURE, GLOBAL FOLD, AND DYNAMICS OF CHEMOTAXIS-Y PROTEIN USING 3-DIMENSIONAL AND 4-DIMENSIONAL HETERONUCLEAR (C-13,N-15) NMR-SPECTROSCOPY, Biochemistry, 33(35), 1994, pp. 10731-10742
NMR spectroscopy has been used to study recombinant Escherichia coli C
heY, a 128-residue protein involved in regulating bacterial chemotaxis
. Heteronuclear three- and four-dimensional (3D and 4D) experiments ha
ve provided sequence-specific resonance assignments and quantitation o
f short-, medium-, and long-range distance restraints from nuclear Ove
rhauser enhancement (NOE) intensities. These distance restraints were
further supplemented with measurements of three-bond scalar coupling c
onstants to define the local dihedral angles, and with the identificat
ion of amide protons undergoing slow solvent exchange from which hydro
gen-bonding patterns were identified. The current model structure show
s the same global fold of CheY as existing X-ray structures (Volt & Ma
tsumura, 1991; Stock et al. 1993) with a (beta/alpha)(5) motif of five
parallel beta-strands at the central core surrounded by three alpha-h
elices on one face and with two on the opposite side. Heteronuclear N-
15-H-1 relaxation experiments are interpreted to show portions of the
protein structure in the Mg2+ binding loop are ill-defined because of
slow motion (chemical exchange) on the NMR time scale. Moreover, the p
resence of Mg2+ disrupts the salt bridge between the highly conserved
Lys-109 and Asp-57, the site of phosphorylation.