ALLOZYME CLADISTICS IN MALACOLOGY - WHY AND HOW

Authors
Citation
Kc. Emberton, ALLOZYME CLADISTICS IN MALACOLOGY - WHY AND HOW, The Nautilus, 108, 1994, pp. 44-50
Citations number
NO
Categorie Soggetti
Zoology
Journal title
ISSN journal
00281344
Volume
108
Year of publication
1994
Supplement
2
Pages
44 - 50
Database
ISI
SICI code
0028-1344(1994)108:<44:ACIM-W>2.0.ZU;2-S
Abstract
A hypothetical but plausible data set is introduced for which Mickevic h and Mitter's (1981, 1983) qualitative-coding, minimum-turnover cladi stic (= discrete parsimony) method accurately reconstructs phylogeny, whether rare alleles are detected or not, but for which both the UPGMA distance method and a hand-calculated application of Swofford and Ber locher's (1987) frequency-parsimony method give incorrect phylogenies. Mickevich and Mitter's (1981, 1983) method is outlined and demonstrat ed. When applying this method to 20 polygyrid genera using Hennig86 (F arris, 1988), two problems arose and were circumvented. First, allelic combinations occurred in complexly interrelated sets (interim solutio n: treat such sets as single character-states); and second, alternativ e character-state trees existed for each locus (solution: binary-code each alternative, then weight by the reciprocal of the number of alter natives). Cladistic analysis of the polygyrid-genera allozyme data (Em berton, 1994) ordered yielded the same topology as, but higher resolut ion than, when run unordered.