Tm. Tarasow et al., INVESTIGATION OF MEDIUM EFFECTS IN A FAMILY OF DECARBOXYLASE ANTIBODIES, Journal of the American Chemical Society, 116(18), 1994, pp. 7959-7963
A family of naphthalenedisulfonate-binding antibodies catalyze the dec
arboxylation of 5-nitro-3-carboxybenzisoxazole, providing a series of
structurally similar catalysts for investigating the influence of prot
ein microenvironment on reactivity. Eight representative catalysts and
one noncatalytic hapten binder have been characterized in detail to a
ssess their catalytic properties. The Michaelis-Menten parameters, inh
ibition constants for hapten and product, and thermodynamic activation
parameters are reported for each catalyst. The rate accelerations pro
vided by the catalytic antibodies range from 1620 to 23 200. The antib
odies display similar affinities for the hapten, substrate, and produc
t, suggesting that binding differences are not the major cause of the
variation in catalytic activity. Instead, catalytic efficiency appears
to correlate roughly with-the hydrophobicity of the antibody active s
ite as judged by fluorescence spectroscopy. Furthermore, five of the-c
atalytic antibodies fit an isokinetic relationship, displaying a wide
variation in thermodynamic activation parameters characterized by enth
alpy-entropy compensation. The data illustrate the potential of simila
r proteins to solve a specific chemical problem in slightly different
ways and warrant detailed structural investigations to determine the p
recise combination of hydrogen bonding, electrostatic, and dispersive
interactions that constitute medium effects in these related proteins.