I. Tvaroska et Jp. Carver, AB-INITIO MOLECULAR-ORBITAL CALCULATION OF CARBOHYDRATE MODEL COMPOUNDS .2. CONFORMATIONAL-ANALYSIS OF AXIAL AND EQUATORIAL 2-METHOXYTETRAHYDROPYRANS, Journal of physical chemistry, 98(38), 1994, pp. 9477-9485
An ab initio study of the conformational behavior of alpha- and beta-g
lycosidic linkages has been carried out on axial and equatorial 2-meth
oxytetrahydropyrans as models. The geometry of the conformers about th
e glycosidic C-O bond was determined by gradient optimization at the S
CF level using the 4-21G and 6-31G basis sets and at the second-order
Moller-Plesset level using the MP2/6-31G basis set. The potential of
rotation has been calculated using 4-21G, 6-31G, 6-31+G*, MP2/6-31G*
, and 6-311++G* basis sets. At all levels of theory, both axial and e
quatorial forms prefer the GT conformation around the C-O glycosidic b
ond. Conformational changes in bond lengths and angles at the anomeric
center also display significant variations with computational methods
, but structural trends ate in fair agreement with experiment. The cor
rection for the effect of zero-point energy, thermal energy, and entro
py on the axial-equatorial energy difference at the 6-31G level is -0
.63 kcal/mol. After these corrections to the energy difference calcula
ted at the 6-31G level, the axial form is favored by 0.84 kcal/mol, i
n reasonable agreement with experimental values of Delta G = 0.7-0.9 k
cal/mol estimated for nonpolar solvents. Solvent effects reduce this e
nergy difference; in the extreme case of water, a value of 0.24 kcal/m
ol was obtained. Complete torsional profiles have been obtained for ro
tation about the glycosidic C-O bond in eleven solvents, and the calcu
lated energy differences are in fair agreement with experimental data
on 2-alkoxytetrahydropyrans in solutions. The MM3 (epsilon = 1.5) forc
e field reproduces the 6-31G ab initio energy difference reasonably w
ell, but barrier heights are in poor agreement with the ab initio data
. The calculated energies and geometries provide an essential set of d
ata for the parametrization of the behavior of acetal fragments in mol
ecular mechanical force fields for carbohydrates.