Halobacterial flagella were adsorbed on mica and imaged with an atomic
force microscope in air. Different assemblies such as large, net-like
structures, and straight flagella aligned by flow were observed. The
hypothesis of individual flagellar motors was confirmed by frequent ob
servation of knobs at the end of single flagella. A periodic substruct
ure was observed along flagellar strands with a spacing of 50-100 nm.
The diameter of halobacterial flagella was determined as 11 +/- 4 nm.
The influence of two different preparations on the flagellar profile,
and reasons for the distortion of height and width are discussed.