Nucleotide sequence information derived from DNA segments of the human
and other genomes is accumulating rapidly. However, it frequently pro
ves difficult to use such short DNA segments to identify clones in gen
omic libraries or fragments in blots of the whole genome or for in sit
u analysis of chromosomes. Oligonucleotide probes, consisting of two t
arget-complementary segments, connected by a linker sequence, were des
igned. Upon recognition of the specific nucleic acid molecule the ends
of the probes were joined through the action of a ligase, creating ci
rcular DNA molecules catenated to the target sequence. These probes th
us provide highly specific detection with minimal background.