The concept of developmental compartments originated in studies of Dro
sophila embryogenesis. This review examines the hypothesis that the mo
dular structure of the vertebrate cerebellum is strongly analogous to
this earlier scheme. The pattern of cerebellar development, the adult
circuitry, a variety of molecular markers expressed in specific subdiv
isions, and the phenotypes of several neurological mutations all provi
de abundant evidence that the vertebrate cerebellum is organized into
modules. We present the case that, as a group, these markers reveal di
stinct boundaries that partition the cerebellum into true developmenta
l compartments. Although this reductionist viewpoint advances our unde
rstanding of cerebellar organization, the relationship between these c
ompartments and the functional behavior of the cerebellum remains a my
stery.